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Submissions from 2024

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Efficacy of photodynamic therapy as an adjunct to scaling and root planing on clinical parameters and microbial composition in subgingival plaque of periodontitis patients: A split-mouth randomized clinical trial, Paul W. Bible, Min Nie, Peien Huang, Peiyao Peng, Daonan Shen, Lei Zhao, Duan Jiang, Yuqin Shen, Lai Wei, Jingmei Yang, Jun Wang, and Yafei Wu

Submissions from 2023

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Cross-Cultural Affective Evaluation of Kawaii Robots in Virtual Spaces, Dave Berque, Hiroko Chiba, Tipporn Laohakangvalvit, Peeraya Sripian, Midori Sugaya, and Michiko Ohkura

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Design and Cross-cultural Evaluation of a Kawaii (Cute) Roomba Vacuum, Dave Berque, Hiroko Chiba, and Benjamin WIlkerson

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Early detection of SARS-CoV-2 variants through dynamic co-mutation network surveillance, Paul W. Bible, Qiang Huang, Huining Qiu, Yong Huang, Fangfang Zheng, Jing Gu, Jian Sun, Yuantao Hao, and Yu Liu

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A chromosome-scale genome sequence of sudangrass (Sorghum sudanense) highlights the genome evolution and regulation of dhurrin biosynthesis, Paul W. Bible, Jieqin Li, Wenmiao Tu, Jian Zheng, Peng Jin, Yanlong Liu, Junli Du, Jiacheng Zheng, Yi-Hong Wang, and Qiuwen Zhan

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An Open Guide to Data Structures and Algorithms, Paul W. Bible and Lucas Moser

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Emotion-Aware Music Recommendation, Hieu Tran, Tuan Le, Anh Do, Tram Vu, Steven Bogaerts, and Brian T. Howard

Submissions from 2022

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A New Way to Trace SARS-CoV-2 Variants Through Weighted Network Analysis of Frequency Trajectories of Mutations, Paul W. Bible, Qiang Huang, Qiang Zhang, Qiaoxing Liang, Fangfang Zheng, Ying Wang, Yuantao Hao, and Yu Liu

Submissions from 2021

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Cross-cultural Design and Evaluation of Robot Prototypes based on Kawaii (Cute) Attributes, Dave Berque, Hiroko Chiba, Kevin Bautista, Jordyn Blakey, Eric Spehlmann, Cade Wright, and et al.

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Design and Implementation of Kawaii Robots by Japanese and American University Students using Remote Collaboration, Dave Berque, Hiroko Chiba, Michiko Ohkura, Midori Sugaya, Peeraya Sripian, and Tipporn Laohakangvalvit

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"Shared Queue" Section 3.4 of online text: Parallel Computing for Beginners, Steven Bogaerts

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A Highly-Parameterized Ensemble to Play Gin Rummy, Masayuki Nagai '22, Kavya Shrivastava '23, Kien Ta '22, Steven Bogaerts, and Chad Byers

Submissions from 2020

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Geographic Difference Shaped Human Ocular Surface Metagenome of Young Han Chinese From Beijing, Wenzhou, and Guangzhou Cities, Paul W. Bible, Yuhua Deng, Xiaofeng Wen, Xiao Hu, and et al.

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DeepMicrobes: taxonomic classification for metagenomics with deep learning, Paul W. Bible, Qiaoxing Liang, Yu Liu, Bin Zou, and Lai Wei

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CSMD: a computational subtraction-based microbiome discovery pipeline for species-level characterization of clinical metagenomic samples, Paul W. Bible, Yu Liu, Bin Zou, Qiaoxing Liang, Cong Dong, and et al.

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An Unexplored Relationship: Women in Computing and Athletics, Gloria Childress Townsend, Khadija Jirari Stewart, and Sharmin Tunguz

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Tackling the underrepresentation of women in computing and finding novel help in athletics, Gloria Childress Townsend, Khadija Jirari Stewart, and Sharmin Tunguz

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The Power of Female Athletes to Level the Computer Science Playing Field, Gloria Childress Townsend, Khadija Jirari Stewart, and Sharmin Tunguz

Submissions from 2019

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Metagenomic analysis reveals gestational diabetes mellitus-related microbial regulators of glucose tolerance, Paul W. Bible, Yanxin Wu, Sizhe Long, Wai-kit Ming, and et al.

Submissions from 2018

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Epigenetics, microbiota, and intraocular inflammation: New paradigms of immune regulation in the eye, Paul W. Bible, Xiaofeng Wen, Xiao Hu, Li Miao, Yuhua Deng, and Lai Wei

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Decreased Expression of TIM-3 on Th17 Cells Associated with Ophthalmopathy in Patients with Graves’ Disease, Paul W. Bible, J. Zhao, B. Lin, H. Deng, X. Zhi, and et al.

Submissions from 2017

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A novel DLX3–PKC integrated signaling network drives keratinocyte differentiation, Paul W. Bible, Elisabetta Palazzo, Megan D. Kellett, Christophe Cataisson, Shrea Bhattacharya, Hong-wei Sun, and et al.

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The effects of shared information on semantic calculations in the gene ontology, Paul W. Bible, Hon-Wei Sun, Maria I. Morasso, Rasiah Loganantharaj, and Lai Wei

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Panax Notoginseng Saponin Controls IL-17 Expression in Helper T Cells, Paul W. Bible, Jia-Ru Wei, Xiaofeng Wen, Zhiyu Li, Robert B. Nussenblatt, and Lai Wei

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The Influence of Age and Sex on Ocular Surface Microbiota in Healthy Adults, Paul W. Bible, Xiaofeng Wen, Li Miao, Yuhua Deng, Xiao Hu, and et al.

Submissions from 2016

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DLX3-Dependent Regulation of Ion Transporters and Carbonic Anhydrases is Crucial for Enamel Mineralization, Paul W. Bible, Olivier Duverger, Takahiro Ohara, Angela Zah, and Maria I. Morasso

Submissions from 2015

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PAPST, a User Friendly and Powerful Java Platform for ChIP-Seq Peak Co-Localization Analysis and Beyond, Paul W. Bible, Yuka Kanno, Lai Wei, Stephen R. Brooks, John J. O'Shea, Maria I. Morasso, Rasiah Loganantharaj, and Hong-wei Sun

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The homeoprotein DLX3 and tumor suppressor p53 co-regulate cell cycle progression and squamous tumor growth, Paul W. Bible, E. Palazzo, M. Kellett, C. Cataisson, A. Gormley, V. Pietroni, and et al.

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Leveraging Synergy Between Database and Programming Language Courses, Brian T. Howard

Submissions from 2014

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Calmodulin 4 is dispensable for epidermal barrier formation and wound healing in mice, Paul W. Bible, Julianne C. Lessard, Alexnadr Kalinin, and Maria I. Morasso

Submissions from 2012

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The folliculin-FNIP1 pathway deleted in human Birt-Hogg-Dubé syndrome is required for murine B-cell development, Paul W. Bible

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A new algorithm for quantifying binding site pattern similarity with applications for Next Generation Sequencing, Paul W. Bible and Rasiah Loganantharaj

Submissions from 2011

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Functional and Epigenetic Studies Reveal Multistep Differentiation and Plasticity of In Vitro-Generated and In Vivo-Derived Follicular T Helper Cells, Paul W. Bible, Kristina T. Lu, Yuka Kanno, Jennifer L. Cannons, Robin Handon, and et al.

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Identification of SSR markers associated with height using pool-based genome-wide association mapping in sorghum, Paul W. Bible, Yi-Hong Wang, Rasiah Loganantharaj, and Hari D. Upadhyaya

Submissions from 2009

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V-Volcano: Addressing Students’ Misconceptions in Earth Sciences Learning through Virtual Reality Simulations, Paul W. Bible, Hollie Boudreaux, Carolina Cruz-Neira, Thomas Parham, Cinzia Cervato, William Gallus, and Pete Stelling